nvbio::aln::priv::AlignmentStream< t_aligner_type, pattern_set_type, qualities_set_type, text_set_type, sink_iterator >::context_type Struct Reference

Detailed description

template< typename t_aligner_type, typename pattern_set_type, typename qualities_set_type, typename text_set_type, typename sink_iterator>
struct nvbio::aln::priv::AlignmentStream< t_aligner_type, pattern_set_type, qualities_set_type, text_set_type, sink_iterator >::context_type

Definition at line 877 of file batched_inl.h.

#include <batched_inl.h>

Public Members
int32	min_score
sink_type	sink

Member Data Documentation

template<typename t_aligner_type , typename pattern_set_type , typename qualities_set_type , typename text_set_type , typename sink_iterator >

int32 nvbio::aln::priv::AlignmentStream< t_aligner_type, pattern_set_type, qualities_set_type, text_set_type, sink_iterator >::context_type::min_score

Definition at line 879 of file batched_inl.h.

template<typename t_aligner_type , typename pattern_set_type , typename qualities_set_type , typename text_set_type , typename sink_iterator >

sink_type nvbio::aln::priv::AlignmentStream< t_aligner_type, pattern_set_type, qualities_set_type, text_set_type, sink_iterator >::context_type::sink

Definition at line 880 of file batched_inl.h.

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The documentation for this struct was generated from the following file:

• E:/git/nvbio/nvbio/alignment/batched_inl.h