NVBIO
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Groups Pages
nvbio::HostBWTHandler< PackedStream< word_type *, uint8, SYMBOL_SIZE, BIG_ENDIAN, uint64 > > Member List

This is the complete list of members for nvbio::HostBWTHandler< PackedStream< word_type *, uint8, SYMBOL_SIZE, BIG_ENDIAN, uint64 > >, including all inherited members.

do_process(const uint32 n_suffixes, const bwt_iterator bwt)nvbio::HostBWTHandler< PackedStream< word_type *, uint8, SYMBOL_SIZE, BIG_ENDIAN, uint64 > >inline
HostBWTHandler(OutputIterator _output)nvbio::HostBWTHandler< PackedStream< word_type *, uint8, SYMBOL_SIZE, BIG_ENDIAN, uint64 > >inline
offsetnvbio::HostBWTHandler< PackedStream< word_type *, uint8, SYMBOL_SIZE, BIG_ENDIAN, uint64 > >
outputnvbio::HostBWTHandler< PackedStream< word_type *, uint8, SYMBOL_SIZE, BIG_ENDIAN, uint64 > >
OutputIterator typedefnvbio::HostBWTHandler< PackedStream< word_type *, uint8, SYMBOL_SIZE, BIG_ENDIAN, uint64 > >
process(const uint32 n_suffixes, const uint32 bits_per_symbol, const uint32 *bwt, const uint32 n_dollars, const uint64 *dollar_pos, const uint64 *dollar_ids)nvbio::HostBWTHandler< PackedStream< word_type *, uint8, SYMBOL_SIZE, BIG_ENDIAN, uint64 > >inlinevirtual
process(const uint32 n_suffixes, const uint8 *bwt, const uint32 n_dollars, const uint64 *dollar_pos, const uint64 *dollar_ids)nvbio::HostBWTHandler< PackedStream< word_type *, uint8, SYMBOL_SIZE, BIG_ENDIAN, uint64 > >inlinevirtual
SYMBOLS_PER_WORDnvbio::HostBWTHandler< PackedStream< word_type *, uint8, SYMBOL_SIZE, BIG_ENDIAN, uint64 > >static
WORD_SIZEnvbio::HostBWTHandler< PackedStream< word_type *, uint8, SYMBOL_SIZE, BIG_ENDIAN, uint64 > >static
~SetBWTHandler()nvbio::SetBWTHandlerinlinevirtual