nvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceStagedThreadScheduler > Member List

This is the complete list of members for nvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceStagedThreadScheduler >, including all inherited members.

aligner_type typedef	nvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceStagedThreadScheduler >
BLOCKDIM	nvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceStagedThreadScheduler >	static
cell_type typedef	nvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceStagedThreadScheduler >
column_storage(const uint32 max_pattern_len, const uint32 max_text_len)	nvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceStagedThreadScheduler >	inlinestatic
enact(stream_type stream, uint64 temp_size=0u, uint8 *temp=NULL)	nvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceStagedThreadScheduler >	inline
max_temp_storage(const uint32 max_pattern_len, const uint32 max_text_len, const uint32 stream_size)	nvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceStagedThreadScheduler >	inlinestatic
min_temp_storage(const uint32 max_pattern_len, const uint32 max_text_len, const uint32 stream_size)	nvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceStagedThreadScheduler >	inlinestatic