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nvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceThreadBlockScheduler< BLOCKDIM, MINBLOCKS > > Member List

This is the complete list of members for nvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceThreadBlockScheduler< BLOCKDIM, MINBLOCKS > >, including all inherited members.

aligner_type typedefnvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceThreadBlockScheduler< BLOCKDIM, MINBLOCKS > >
cell_type typedefnvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceThreadBlockScheduler< BLOCKDIM, MINBLOCKS > >
enact(stream_type stream, uint64 temp_size=0u, uint8 *temp=NULL)nvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceThreadBlockScheduler< BLOCKDIM, MINBLOCKS > >
max_temp_storage(const uint32 max_pattern_len, const uint32 max_text_len, const uint32 stream_size)nvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceThreadBlockScheduler< BLOCKDIM, MINBLOCKS > >inlinestatic
min_temp_storage(const uint32 max_pattern_len, const uint32 max_text_len, const uint32 stream_size)nvbio::aln::BatchedBandedAlignmentScore< BAND_LEN, stream_type, DeviceThreadBlockScheduler< BLOCKDIM, MINBLOCKS > >inlinestatic