NVBIO
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A set of Myers bit-vectors for 5-letter alphabets
Definition at line 157 of file myers_banded_inl.h.
#include <myers_banded_inl.h>
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NVBIO_FORCEINLINE NVBIO_HOST_DEVICE | MyersBitVectors () |
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void | load (const uint8 c, const uint32 v) |
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE uint32 | get (const uint8 c) const |
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void | shift () |
Public Members | |
uint32 | B [5] |
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Definition at line 160 of file myers_banded_inl.h.
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inline |
Definition at line 178 of file myers_banded_inl.h.
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Definition at line 168 of file myers_banded_inl.h.
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Definition at line 186 of file myers_banded_inl.h.
uint32 nvbio::aln::priv::MyersBitVectors< 5 >::B[5] |
Definition at line 193 of file myers_banded_inl.h.