nvbio::aln::priv::alignment_checkpointed_dispatch< CHECKPOINTS, HammingDistanceAligner< TYPE, scoring_type >, pattern_string, qual_string, text_string, column_type > Member List

This is the complete list of members for nvbio::aln::priv::alignment_checkpointed_dispatch< CHECKPOINTS, HammingDistanceAligner< TYPE, scoring_type >, pattern_string, qual_string, text_string, column_type >, including all inherited members.

aligner_type typedef	nvbio::aln::priv::alignment_checkpointed_dispatch< CHECKPOINTS, HammingDistanceAligner< TYPE, scoring_type >, pattern_string, qual_string, text_string, column_type >
dispatch_checkpoints(const aligner_type aligner, const pattern_string pattern, const qual_string quals, const text_string text, const int32 min_score, sink_type &sink, checkpoint_type checkpoints, column_type column)	nvbio::aln::priv::alignment_checkpointed_dispatch< CHECKPOINTS, HammingDistanceAligner< TYPE, scoring_type >, pattern_string, qual_string, text_string, column_type >	inlinestatic
dispatch_submatrix(const aligner_type aligner, const pattern_string pattern, const qual_string quals, const text_string text, const int32 min_score, checkpoint_type checkpoints, const uint32 checkpoint_id, submatrix_type submatrix, column_type column)	nvbio::aln::priv::alignment_checkpointed_dispatch< CHECKPOINTS, HammingDistanceAligner< TYPE, scoring_type >, pattern_string, qual_string, text_string, column_type >	inlinestatic