NVBIO
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An auxiliary class to represent the hit array bound to a given read
Definition at line 142 of file scoring_queues.h.
#include <scoring_queues.h>
Public Methods | |
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE | HitArray (ReadHitsIndexDeviceView &index, const uint32 read_index) |
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void | resize (const uint32 size) const |
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE uint32 | size () const |
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE uint32 & | operator[] (const uint32 slot) |
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE uint32 | operator[] (const uint32 slot) const |
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constructor
Definition at line 147 of file scoring_queues.h.
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return the i-th hit link
Definition at line 162 of file scoring_queues.h.
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return the i-th hit link
Definition at line 167 of file scoring_queues.h.
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set the number of hits
Definition at line 152 of file scoring_queues.h.
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return the number of hits
Definition at line 157 of file scoring_queues.h.