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nvbio::bowtie2::cuda::detail::seed_mapper< CASE_PRUNING_MAPPING > Member List

This is the complete list of members for nvbio::bowtie2::cuda::detail::seed_mapper< CASE_PRUNING_MAPPING >, including all inherited members.

enact(const FMType fmi, const rFMType rfmi, const SeedIterator seed, const uint2 read_range, const uint32 pos, const uint32 seed_len, HitType &hitheap, uint32 &range_sum, uint32 &range_count, const ParamsPOD &params, const bool fw, const bool rc)nvbio::bowtie2::cuda::detail::seed_mapper< CASE_PRUNING_MAPPING >inlinestatic