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alignment_bam.cpp File Reference
#include <nvbio-aln-diff/alignment.h>
#include <contrib/bamtools/BamReader.h>
#include <nvbio/basic/console.h>
#include <crc/crc.h>

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Classes

struct  nvbio::alndiff::BAMAlignmentStream
 

Namespaces

 nvbio
 Define a vector_view POD type and plain_view() for std::vector.
 
 nvbio::alndiff
 

Functions

AlignmentStream * nvbio::alndiff::open_bam_file (const char *file_name)