#include <nvbio/basic/atomics.h>
#include <cstdio>
#include <cstdlib>
#include <cstring>
#include <string>
#include <zlib/zlib.h>
#include <stdint.h>

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Classes
struct	BamTools::BgzfData

Namespaces
	BamTools

Variables
const int	BamTools::GZIP_ID1 = 31

const int	BamTools::GZIP_ID2 = 139

const int	BamTools::CM_DEFLATE = 8

const int	BamTools::FLG_FEXTRA = 4

const int	BamTools::OS_UNKNOWN = 255

const int	BamTools::BGZF_XLEN = 6

const int	BamTools::BGZF_ID1 = 66

const int	BamTools::BGZF_ID2 = 67

const int	BamTools::BGZF_LEN = 2

const int	BamTools::GZIP_WINDOW_BITS = -15

const int	BamTools::Z_DEFAULT_MEM_LEVEL = 8

const int	BamTools::BLOCK_HEADER_LENGTH = 18

const int	BamTools::BLOCK_FOOTER_LENGTH = 8

const int	BamTools::MAX_BLOCK_SIZE = 65536

const int	BamTools::DEFAULT_BLOCK_SIZE = 65536

Classes

Namespaces

Variables