NVBIO
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Groups Pages
Namespaces | Functions
bidir_inl.h File Reference

Go to the source code of this file.

Namespaces

 nvbio
 Define a vector_view POD type and plain_view() for std::vector.
 

Functions

template<typename TRankDictionary1 , typename TSuffixArray1 , typename TRankDictionary2 , typename TSuffixArray2 >
NVBIO_FORCEINLINE
NVBIO_HOST_DEVICE void 
nvbio::extend_forward (const fm_index< TRankDictionary1, TSuffixArray1 > &f_fmi, const fm_index< TRankDictionary2, TSuffixArray2 > &r_fmi, typename fm_index< TRankDictionary1, TSuffixArray1 >::range_type &f_range, typename fm_index< TRankDictionary2, TSuffixArray2 >::range_type &r_range, uint8 c)
 
template<typename TRankDictionary1 , typename TSuffixArray1 , typename TRankDictionary2 , typename TSuffixArray2 >
NVBIO_FORCEINLINE
NVBIO_HOST_DEVICE void 
nvbio::extend_backwards (const fm_index< TRankDictionary1, TSuffixArray1 > &f_fmi, const fm_index< TRankDictionary2, TSuffixArray2 > &r_fmi, typename fm_index< TRankDictionary1, TSuffixArray1 >::range_type &f_range, typename fm_index< TRankDictionary2, TSuffixArray2 >::range_type &r_range, uint8 c)