filter.h File Reference

#include <nvbio/fmindex/fmindex.h>
#include <nvbio/basic/types.h>
#include <nvbio/basic/numbers.h>
#include <nvbio/basic/algorithms.h>
#include <nvbio/basic/exceptions.h>
#include <nvbio/basic/vector.h>
#include <nvbio/basic/cuda/sort.h>
#include <nvbio/basic/cuda/primitives.h>
#include <nvbio/strings/string.h>
#include <thrust/sort.h>
#include <thrust/scan.h>
#include <thrust/iterator/constant_iterator.h>
#include <thrust/iterator/counting_iterator.h>
#include <nvbio/fmindex/filter_inl.h>

Go to the source code of this file.

Classes
struct	nvbio::FMIndexFilter< system_tag, fm_index_type >
struct	nvbio::FMIndexFilter< host_tag, fm_index_type >
struct	nvbio::FMIndexFilter< device_tag, fm_index_type >
struct	nvbio::FMIndexFilterHost< fm_index_type >
struct	nvbio::FMIndexFilterDevice< fm_index_type >

Namespaces
	nvbio
	Define a vector_view POD type and plain_view() for std::vector.