stats.h File Reference

#include <nvBowtie/bowtie2/cuda/defs.h>
#include <nvBowtie/bowtie2/cuda/params.h>
#include <nvbio/basic/timer.h>
#include <vector>
#include <deque>

Go to the source code of this file.

Classes
struct	nvbio::bowtie2::cuda::AlignmentStats
struct	nvbio::bowtie2::cuda::Stats

Namespaces
	nvbio
	Define a vector_view POD type and plain_view() for std::vector.
	nvbio::io
	nvbio::bowtie2
	nvbio::bowtie2::cuda

Typedefs
typedef nvbio::TimeSeries	nvbio::bowtie2::cuda::KernelStats

Functions
void	nvbio::bowtie2::cuda::generate_report_header (const uint32 n_reads, const Params &params, AlignmentStats &aln_stats, const uint32 n_devices, const Stats *device_stats, const char *report)
void	nvbio::bowtie2::cuda::generate_device_report (const uint32 id, Stats &stats, AlignmentStats &aln_stats, const char *report)