output_priv.cpp File Reference

#include <nvbio/io/output/output_priv.h>
#include <nvbio/io/output/output_batch.h>
#include <nvbio/basic/timer.h>
#include <nvbio/basic/vector.h>
#include <stdio.h>
#include <stdarg.h>

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Namespaces
	nvbio
	Define a vector_view POD type and plain_view() for std::vector.
	nvbio::io

Functions
AlignmentData	nvbio::io::get (HostOutputBatchSE &batch, const uint32 aln_id)
AlignmentData	nvbio::io::get_mate (HostOutputBatchPE &batch, const uint32 aln_id, const AlignmentMate mate)
AlignmentData	nvbio::io::get_anchor_mate (HostOutputBatchPE &batch, const uint32 aln_id)
AlignmentData	nvbio::io::get_opposite_mate (HostOutputBatchPE &batch, const uint32 aln_id)