params.cpp File Reference

#include <nvBowtie/bowtie2/cuda/params.h>
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <numeric>
#include <functional>
#include <map>

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Namespaces
	nvbio
	Define a vector_view POD type and plain_view() for std::vector.
	nvbio::bowtie2
	nvbio::bowtie2::cuda

Functions
std::map< std::string, std::string >	nvbio::bowtie2::cuda::load_options (const char *name)
bool	nvbio::bowtie2::cuda::is_number (const char *str, uint32 len=uint32(-1))
SimpleFunc	nvbio::bowtie2::cuda::parse_function (const char *str, const SimpleFunc def)
template<typename options_type >
SimpleFunc	nvbio::bowtie2::cuda::func_option (const options_type &options, const char *name, const SimpleFunc func)
template<typename options_type >
SimpleFunc	nvbio::bowtie2::cuda::func_option (const options_type &options, const char *name1, const char *name2, const SimpleFunc func)
void	nvbio::bowtie2::cuda::parse_options (Params &params, const std::map< std::string, std::string > &options, bool init)