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NVBIO
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NVBIO
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Classes | |
| struct | nvbio::is_sorted_iterator< Iterator1, Iterator2 > |
| struct | nvbio::is_segment_sorted_iterator< Iterator1, Iterator2, Headflags > |
Namespaces | |
| nvbio | |
| Define a vector_view POD type and plain_view() for std::vector. | |
Functions | |
| template<typename PredicateIterator > | |
| bool | nvbio::any (const host_tag tag, const uint32 n, const PredicateIterator pred) |
| template<typename PredicateIterator > | |
| bool | nvbio::all (const host_tag tag, const uint32 n, const PredicateIterator pred) |
| template<typename system_tag , typename PredicateIterator > | |
| bool | nvbio::any (const uint32 n, const PredicateIterator pred) |
| template<typename system_tag , typename PredicateIterator > | |
| bool | nvbio::all (const uint32 n, const PredicateIterator pred) |
| template<typename T1 , typename T2 > | |
| NVBIO_FORCEINLINE NVBIO_HOST_DEVICE is_sorted_iterator< T1, T2 > | nvbio::operator+ (const is_sorted_iterator< T1, T2 > it, const int64 i) |
| template<typename T1 , typename T2 > | |
| NVBIO_FORCEINLINE NVBIO_HOST_DEVICE int64 | nvbio::operator- (const is_sorted_iterator< T1, T2 > it1, const is_sorted_iterator< T1, T2 > it2) |
| template<typename T1 , typename T2 > | |
| NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool | nvbio::operator!= (const is_sorted_iterator< T1, T2 > it1, const is_sorted_iterator< T1, T2 > it2) |
| template<typename T1 , typename T2 > | |
| NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool | nvbio::operator== (const is_sorted_iterator< T1, T2 > it1, const is_sorted_iterator< T1, T2 > it2) |
| template<typename T1 , typename T2 , typename H > | |
| NVBIO_FORCEINLINE NVBIO_HOST_DEVICE is_segment_sorted_iterator< T1, T2, H > | nvbio::operator+ (const is_segment_sorted_iterator< T1, T2, H > it, const int64 i) |
| template<typename T1 , typename T2 , typename H > | |
| NVBIO_FORCEINLINE NVBIO_HOST_DEVICE int64 | nvbio::operator- (const is_segment_sorted_iterator< T1, T2, H > it1, const is_segment_sorted_iterator< T1, T2, H > it2) |
| template<typename T1 , typename T2 , typename H > | |
| NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool | nvbio::operator!= (const is_segment_sorted_iterator< T1, T2, H > it1, const is_segment_sorted_iterator< T1, T2, H > it2) |
| template<typename T1 , typename T2 , typename H > | |
| NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool | nvbio::operator== (const is_segment_sorted_iterator< T1, T2, H > it1, const is_segment_sorted_iterator< T1, T2, H > it2) |
| template<typename system_tag , typename Iterator > | |
| bool | nvbio::is_sorted (const uint32 n, const Iterator values) |
| template<typename system_tag , typename Iterator , typename Headflags > | |
| bool | nvbio::is_segment_sorted (const uint32 n, const Iterator values, const Headflags flags) |
| template<typename Iterator , typename Functor > | |
| void | nvbio::for_each (const host_tag tag, const uint64 n, const Iterator in, Functor functor) |
| template<typename Iterator , typename Functor > | |
| void | nvbio::for_each (const device_tag tag, const uint64 n, const Iterator in, Functor functor) |
| template<typename system_tag , typename Iterator , typename Functor > | |
| void | nvbio::for_each (const uint64 n, const Iterator in, Functor functor) |
| template<typename Iterator , typename Output , typename Functor > | |
| void | nvbio::transform (const device_tag tag, const uint64 n, const Iterator in, const Output out, const Functor functor) |
| template<typename Iterator , typename Output , typename Functor > | |
| void | nvbio::transform (const host_tag tag, const uint32 n, const Iterator in, const Output out, const Functor functor) |
| template<typename Iterator1 , typename Iterator2 , typename Output , typename Functor > | |
| void | nvbio::transform (const device_tag tag, const uint32 n, const Iterator1 in1, const Iterator2 in2, const Output out, const Functor functor) |
| template<typename Iterator1 , typename Iterator2 , typename Output , typename Functor > | |
| void | nvbio::transform (const host_tag tag, const uint32 n, const Iterator1 in1, const Iterator2 in2, const Output out, const Functor functor) |
| template<typename system_tag , typename Iterator , typename Output , typename Functor > | |
| void | nvbio::transform (const uint32 n, const Iterator in, const Output out, const Functor functor) |
| template<typename system_tag , typename Iterator1 , typename Iterator2 , typename Output , typename Functor > | |
| void | nvbio::transform (const uint32 n, const Iterator1 in1, const Iterator2 in2, const Output out, const Functor functor) |
| template<typename InputIterator , typename BinaryOp > | |
| std::iterator_traits < InputIterator >::value_type | nvbio::reduce (host_tag tag, const uint32 n, InputIterator in, BinaryOp op, nvbio::vector< host_tag, uint8 > &temp_storage) |
| template<typename InputIterator , typename OutputIterator , typename BinaryOp > | |
| void | nvbio::inclusive_scan (host_tag tag, const uint32 n, InputIterator in, OutputIterator out, BinaryOp op, nvbio::vector< host_tag, uint8 > &temp_storage) |
| template<typename InputIterator , typename OutputIterator , typename BinaryOp , typename Identity > | |
| void | nvbio::exclusive_scan (host_tag tag, const uint32 n, InputIterator in, OutputIterator out, BinaryOp op, Identity identity, nvbio::vector< host_tag, uint8 > &temp_storage) |
| template<typename system_tag , typename InputIterator , typename BinaryOp > | |
| std::iterator_traits < InputIterator >::value_type | nvbio::reduce (const uint32 n, InputIterator in, BinaryOp op, nvbio::vector< system_tag, uint8 > &temp_storage) |
| template<typename system_tag , typename InputIterator , typename OutputIterator , typename BinaryOp > | |
| void | nvbio::inclusive_scan (const uint32 n, InputIterator in, OutputIterator out, BinaryOp op, nvbio::vector< system_tag, uint8 > &temp_storage) |
| template<typename system_tag , typename InputIterator , typename OutputIterator , typename BinaryOp , typename Identity > | |
| void | nvbio::exclusive_scan (const uint32 n, InputIterator in, OutputIterator out, BinaryOp op, Identity identity, nvbio::vector< system_tag, uint8 > &temp_storage) |
| template<typename InputIterator , typename FlagsIterator , typename OutputIterator > | |
| uint32 | nvbio::copy_flagged (const host_tag tag, const uint32 n, InputIterator in, FlagsIterator flags, OutputIterator out, nvbio::vector< host_tag, uint8 > &temp_storage) |
| template<typename InputIterator , typename OutputIterator , typename Predicate > | |
| uint32 | nvbio::copy_if (const host_tag tag, const uint32 n, InputIterator in, OutputIterator out, const Predicate pred, nvbio::vector< host_tag, uint8 > &temp_storage) |
| template<typename InputIterator , typename OutputIterator , typename CountIterator > | |
| uint32 | nvbio::runlength_encode (const host_tag tag, const uint32 n, InputIterator in, OutputIterator out, CountIterator counts, nvbio::vector< host_tag, uint8 > &temp_storage) |
| template<typename KeyIterator , typename ValueIterator , typename OutputKeyIterator , typename OutputValueIterator , typename ReductionOp > | |
| uint32 | nvbio::reduce_by_key (const host_tag tag, const uint32 n, KeyIterator keys_in, ValueIterator values_in, OutputKeyIterator keys_out, OutputValueIterator values_out, ReductionOp reduction_op, nvbio::vector< host_tag, uint8 > &temp_storage) |
| template<typename system_tag , typename InputIterator , typename FlagsIterator , typename OutputIterator > | |
| uint32 | nvbio::copy_flagged (const uint32 n, InputIterator in, FlagsIterator flags, OutputIterator out, nvbio::vector< system_tag, uint8 > &temp_storage) |
| template<typename system_tag , typename InputIterator , typename OutputIterator , typename Predicate > | |
| uint32 | nvbio::copy_if (const uint32 n, InputIterator in, OutputIterator out, const Predicate pred, nvbio::vector< system_tag, uint8 > &temp_storage) |
| template<typename system_tag , typename InputIterator , typename OutputIterator , typename CountIterator > | |
| uint32 | nvbio::runlength_encode (const uint32 n, InputIterator in, OutputIterator out, CountIterator counts, nvbio::vector< system_tag, uint8 > &temp_storage) |
| template<typename system_tag , typename KeyIterator , typename ValueIterator , typename OutputKeyIterator , typename OutputValueIterator , typename ReductionOp > | |
| uint32 | nvbio::reduce_by_key (const uint32 n, KeyIterator keys_in, ValueIterator values_in, OutputKeyIterator keys_out, OutputValueIterator values_out, ReductionOp reduction_op, nvbio::vector< system_tag, uint8 > &temp_storage) |
| template<typename KeyIterator , typename ValueIterator , typename OutputIterator > | |
| void | nvbio::lower_bound (const device_tag tag, const uint32 n, ValueIterator values, const uint32 n_keys, KeyIterator keys, OutputIterator indices) |
| template<typename KeyIterator , typename ValueIterator , typename OutputIterator > | |
| void | nvbio::lower_bound (const host_tag tag, const uint32 n, ValueIterator values, const uint32 n_keys, KeyIterator keys, OutputIterator indices) |
| template<typename system_tag , typename KeyIterator , typename ValueIterator , typename OutputIterator > | |
| void | nvbio::lower_bound (const uint32 n, ValueIterator values, const uint32 n_keys, KeyIterator keys, OutputIterator indices) |
| template<typename KeyIterator , typename ValueIterator , typename OutputIterator > | |
| void | nvbio::upper_bound (const device_tag tag, const uint32 n, ValueIterator values, const uint32 n_keys, KeyIterator keys, OutputIterator indices) |
| template<typename KeyIterator , typename ValueIterator , typename OutputIterator > | |
| void | nvbio::upper_bound (const host_tag tag, const uint32 n, ValueIterator values, const uint32 n_keys, KeyIterator keys, OutputIterator indices) |
| template<typename system_tag , typename KeyIterator , typename ValueIterator , typename OutputIterator > | |
| void | nvbio::upper_bound (const uint32 n, ValueIterator values, const uint32 n_keys, KeyIterator keys, OutputIterator indices) |
| template<typename KeyIterator > | |
| void | nvbio::radix_sort (const host_tag tag, const uint32 n, KeyIterator keys, nvbio::vector< host_tag, uint8 > &temp_storage) |
| template<typename system_tag , typename KeyIterator > | |
| void | nvbio::radix_sort (const uint32 n, KeyIterator keys, nvbio::vector< system_tag, uint8 > &temp_storage) |
| template<typename KeyIterator , typename ValueIterator > | |
| void | nvbio::radix_sort (const host_tag tag, const uint32 n, KeyIterator keys, ValueIterator values, nvbio::vector< host_tag, uint8 > &temp_storage) |
| template<typename system_tag , typename KeyIterator , typename ValueIterator > | |
| void | nvbio::radix_sort (const uint32 n, KeyIterator keys, ValueIterator values, nvbio::vector< system_tag, uint8 > &temp_storage) |
| template<typename key_iterator1 , typename key_iterator2 > | |
| uint2 | nvbio::corank (const int32 i, const key_iterator1 A, const int32 m, const key_iterator2 B, const int32 n) |
| template<typename key_iterator1 , typename key_iterator2 , typename value_iterator1 , typename value_iterator2 , typename key_output , typename value_output > | |
| void | nvbio::merge_by_key (const host_tag tag, const uint32 A_len, const uint32 B_len, const key_iterator1 A_keys, const key_iterator2 B_keys, const value_iterator1 A_values, const value_iterator2 B_values, key_output C_keys, value_output C_values) |
| template<typename key_iterator1 , typename key_iterator2 , typename value_iterator1 , typename value_iterator2 , typename key_output , typename value_output > | |
| void | nvbio::merge_by_key (const device_tag tag, const uint32 A_len, const uint32 B_len, const key_iterator1 A_keys, const key_iterator2 B_keys, const value_iterator1 A_values, const value_iterator2 B_values, key_output C_keys, value_output C_values) |
| template<typename system_tag , typename key_iterator1 , typename key_iterator2 , typename value_iterator1 , typename value_iterator2 , typename key_output , typename value_output > | |
| void | nvbio::merge_by_key (const uint32 A_len, const uint32 B_len, const key_iterator1 A_keys, const key_iterator2 B_keys, const value_iterator1 A_values, const value_iterator2 B_values, key_output C_keys, value_output C_values, nvbio::vector< system_tag, uint8 > &temp_storage) |
1.8.4