filter.h File Reference

#include <nvbio/qgram/qgram.h>
#include <nvbio/basic/types.h>
#include <nvbio/basic/numbers.h>
#include <nvbio/basic/vector.h>
#include <nvbio/basic/algorithms.h>
#include <nvbio/basic/exceptions.h>
#include <nvbio/basic/cuda/sort.h>
#include <nvbio/basic/cuda/primitives.h>
#include <thrust/sort.h>
#include <thrust/scan.h>
#include <thrust/iterator/constant_iterator.h>
#include <thrust/iterator/counting_iterator.h>
#include <nvbio/qgram/filter_inl.h>

Go to the source code of this file.

Classes
struct	nvbio::QGramFilter< system_tag, qgram_index_type, query_iterator, index_iterator >
struct	nvbio::QGramFilter< host_tag, qgram_index_type, query_iterator, index_iterator >
struct	nvbio::QGramFilter< device_tag, qgram_index_type, query_iterator, index_iterator >
struct	nvbio::QGramFilterHost< qgram_index_type, query_iterator, index_iterator >
struct	nvbio::QGramFilterDevice< qgram_index_type, query_iterator, index_iterator >

Namespaces
	nvbio
	Define a vector_view POD type and plain_view() for std::vector.