nvbio::aln::SimpleSmithWatermanScheme Member List

This is the complete list of members for nvbio::aln::SimpleSmithWatermanScheme, including all inherited members.

deletion() const	nvbio::aln::SimpleSmithWatermanScheme	inline
insertion() const	nvbio::aln::SimpleSmithWatermanScheme	inline
m_deletion	nvbio::aln::SimpleSmithWatermanScheme
m_insertion	nvbio::aln::SimpleSmithWatermanScheme
m_match	nvbio::aln::SimpleSmithWatermanScheme
m_mismatch	nvbio::aln::SimpleSmithWatermanScheme
match(const uint8 q=0) const	nvbio::aln::SimpleSmithWatermanScheme	inline
mismatch(const uint8 q=0) const	nvbio::aln::SimpleSmithWatermanScheme	inline
mismatch(const uint8 a, const uint8 b, const uint8 q=0) const	nvbio::aln::SimpleSmithWatermanScheme	inline
SimpleSmithWatermanScheme()	nvbio::aln::SimpleSmithWatermanScheme	inline
SimpleSmithWatermanScheme(const int32 match, const int32 mm, const int32 del, const int32 ins)	nvbio::aln::SimpleSmithWatermanScheme	inline