This is the complete list of members for nvbio::bowtie2::cuda::ComputeThreadPE, including all inherited members.

aligner	nvbio::bowtie2::cuda::ComputeThreadPE
ComputeThreadPE(const uint32 _thread_id, const uint32 _device_id, const io::SequenceData &_reference_data, const io::FMIndexData &_driver_data, const std::map< std::string, std::string > &_options, const Params &_params, Stats &_stats)	nvbio::bowtie2::cuda::ComputeThreadPE
create()	nvbio::Thread< ComputeThreadPE >	inline
nvbio::ThreadBase::create(void (func)(void ), void arg)	nvbio::ThreadBase
device_id	nvbio::bowtie2::cuda::ComputeThreadPE
do_run()	nvbio::bowtie2::cuda::ComputeThreadPE
driver_data_device	nvbio::bowtie2::cuda::ComputeThreadPE
driver_data_host	nvbio::bowtie2::cuda::ComputeThreadPE
gauge_batch_size()	nvbio::bowtie2::cuda::ComputeThreadPE
get_id() const	nvbio::ThreadBase	inline
input_thread	nvbio::bowtie2::cuda::ComputeThreadPE
join()	nvbio::Thread< ComputeThreadPE >	inline
options	nvbio::bowtie2::cuda::ComputeThreadPE
output_file	nvbio::bowtie2::cuda::ComputeThreadPE
params	nvbio::bowtie2::cuda::ComputeThreadPE
reference_data_device	nvbio::bowtie2::cuda::ComputeThreadPE
reference_data_host	nvbio::bowtie2::cuda::ComputeThreadPE
run()	nvbio::bowtie2::cuda::ComputeThreadPE
set_id(const uint32 id)	nvbio::ThreadBase	inline
set_input(InputThreadPE *_input_thread)	nvbio::bowtie2::cuda::ComputeThreadPE	inline
set_output(io::OutputFile *_output_file)	nvbio::bowtie2::cuda::ComputeThreadPE	inline
stats	nvbio::bowtie2::cuda::ComputeThreadPE
thread_id	nvbio::bowtie2::cuda::ComputeThreadPE
ThreadBase()	nvbio::ThreadBase
~ThreadBase()	nvbio::ThreadBase