This is the complete list of members for nvbio::cuda::LargeBWTSkeleton< ConfigType, SYMBOL_SIZE, BIG_ENDIAN, storage_type >, including all inherited members.
| bucket_type typedef | nvbio::cuda::LargeBWTSkeleton< ConfigType, SYMBOL_SIZE, BIG_ENDIAN, storage_type > | |
| build_subbuckets(const thrust::host_vector< uint32 > &h_buckets, thrust::host_vector< uint32 > &h_subbuckets, const uint64 max_super_block_size, const uint32 max_block_size) | nvbio::cuda::LargeBWTSkeleton< ConfigType, SYMBOL_SIZE, BIG_ENDIAN, storage_type > | inlinestatic |
| enact(const string_set_type string_set, output_handler &output, BWTParams *params) | nvbio::cuda::LargeBWTSkeleton< ConfigType, SYMBOL_SIZE, BIG_ENDIAN, storage_type > | inlinestatic |
| max_subbucket_size(const thrust::host_vector< uint32 > &h_buckets, const uint64 max_super_block_size, const uint32 limit, LargeBWTStatus *status) | nvbio::cuda::LargeBWTSkeleton< ConfigType, SYMBOL_SIZE, BIG_ENDIAN, storage_type > | inlinestatic |
| string_set_handler_type typedef | nvbio::cuda::LargeBWTSkeleton< ConfigType, SYMBOL_SIZE, BIG_ENDIAN, storage_type > | |
| string_set_type typedef | nvbio::cuda::LargeBWTSkeleton< ConfigType, SYMBOL_SIZE, BIG_ENDIAN, storage_type > | |
| suffix_bucketer_type typedef | nvbio::cuda::LargeBWTSkeleton< ConfigType, SYMBOL_SIZE, BIG_ENDIAN, storage_type > | |
| word_type typedef | nvbio::cuda::LargeBWTSkeleton< ConfigType, SYMBOL_SIZE, BIG_ENDIAN, storage_type > | |
1.8.4