This is the complete list of members for nvbio::io::SequenceDataEncoderImpl< SEQUENCE_ALPHABET >, including all inherited members.
| alphabet() const | nvbio::io::SequenceDataEncoder | inline |
| begin_batch(void) | nvbio::io::SequenceDataEncoderImpl< SEQUENCE_ALPHABET > | inlinevirtual |
| COMPLEMENT_OP enum value | nvbio::io::SequenceDataEncoder | |
| end_batch(void) | nvbio::io::SequenceDataEncoderImpl< SEQUENCE_ALPHABET > | inlinevirtual |
| info() const | nvbio::io::SequenceDataEncoderImpl< SEQUENCE_ALPHABET > | inlinevirtual |
| NO_OP enum value | nvbio::io::SequenceDataEncoder | |
| push_back(const uint32 in_sequence_len, const char *name, const uint8 *base_pairs, const uint8 *quality, const QualityEncoding quality_encoding, const uint32 max_sequence_len, const uint32 trim3, const uint32 trim5, const StrandOp conversion_flags) | nvbio::io::SequenceDataEncoderImpl< SEQUENCE_ALPHABET > | inlinevirtual |
| reserve(const uint32 n_sequences, const uint32 n_bps) | nvbio::io::SequenceDataEncoderImpl< SEQUENCE_ALPHABET > | inlinevirtual |
| REVERSE_COMPLEMENT_OP enum value | nvbio::io::SequenceDataEncoder | |
| REVERSE_OP enum value | nvbio::io::SequenceDataEncoder | |
| SEQUENCE_BIG_ENDIAN | nvbio::io::SequenceDataEncoderImpl< SEQUENCE_ALPHABET > | static |
| SEQUENCE_BITS | nvbio::io::SequenceDataEncoderImpl< SEQUENCE_ALPHABET > | static |
| SEQUENCE_SYMBOLS_PER_WORD | nvbio::io::SequenceDataEncoderImpl< SEQUENCE_ALPHABET > | static |
| SequenceDataEncoder(const Alphabet alphabet) | nvbio::io::SequenceDataEncoder | inline |
| SequenceDataEncoderImpl(SequenceDataHost *data, bool append=false) | nvbio::io::SequenceDataEncoderImpl< SEQUENCE_ALPHABET > | inline |
| StrandOp enum name | nvbio::io::SequenceDataEncoder | |
| ~SequenceDataEncoder() | nvbio::io::SequenceDataEncoder | inlinevirtual |
1.8.4