suffix_trie.h File Reference

#include <nvbio/basic/types.h>
#include <nvbio/basic/iterator.h>
#include <nvbio/trie/suffix_trie_inl.h>

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Classes
struct	nvbio::TrieNode< ALPHABET_SIZE_T, TYPE_T >
struct	nvbio::TrieNode5< TYPE_T >
struct	nvbio::TrieNode< 2, TYPE_T >
struct	nvbio::TrieNode< 3, TYPE_T >
struct	nvbio::TrieNode< 4, TYPE_T >
struct	nvbio::TrieNode< 5, TYPE_T >
struct	nvbio::SuffixTrie< ALPHABET_SIZE_T, NodeIterator >

Namespaces
	nvbio
	Define a vector_view POD type and plain_view() for std::vector.

Enumerations
enum	nvbio::TrieType { nvbio::CompressedTrie, nvbio::UncompressedTrie }

Functions
template<typename TrieType , typename NodeVector >
void	nvbio::build_suffix_trie (const TrieType &in_trie, NodeVector &out_nodes)