sufsort_bucketing.h File Reference

#include <cub/cub.cuh>
#include <mgpuhost.cuh>
#include <moderngpu.cuh>
#include <nvbio/sufsort/sufsort_priv.h>
#include <nvbio/basic/timer.h>
#include <nvbio/basic/cuda/timer.h>
#include <nvbio/basic/cuda/sort.h>
#include <nvbio/basic/cuda/primitives.h>
#include <thrust/host_vector.h>
#include <thrust/device_vector.h>
#include <thrust/adjacent_difference.h>
#include <nvbio/basic/omp.h>

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Classes
struct	nvbio::priv::DeviceCoreSetSuffixBucketer< SYMBOL_SIZE, N_BITS, DOLLAR_BITS, bucket_type >
struct	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >
struct	nvbio::priv::HostCoreSetSuffixBucketer< SYMBOL_SIZE, N_BITS, DOLLAR_BITS, bucket_type >
struct	nvbio::priv::HostSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type >

Namespaces
	nvbio
	Define a vector_view POD type and plain_view() for std::vector.
	nvbio::priv