dna.h File Reference

#include <nvbio/basic/types.h>

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Namespaces
	nvbio
	Define a vector_view POD type and plain_view() for std::vector.

Functions
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE char	nvbio::dna_to_char (const uint8 c)
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE uint8	nvbio::dna_to_iupac16 (const uint8 c)
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE char	nvbio::iupac16_to_char (const uint8 c)
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE uint8	nvbio::char_to_dna (const char c)
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE uint8	nvbio::char_to_iupac16 (const char c)
template<typename SymbolIterator >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void	nvbio::dna_to_string (const SymbolIterator begin, const uint32 n, char *string)
template<typename SymbolIterator >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void	nvbio::dna_to_string (const SymbolIterator begin, const SymbolIterator end, char *string)
template<typename SymbolIterator >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void	nvbio::iupac16_to_string (const SymbolIterator begin, const uint32 n, char *string)
template<typename SymbolIterator >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void	nvbio::iupac16_to_string (const SymbolIterator begin, const SymbolIterator end, char *string)
template<typename SymbolIterator >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void	nvbio::string_to_dna (const char *begin, const char *end, SymbolIterator symbols)
template<typename SymbolIterator >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void	nvbio::string_to_dna (const char *begin, SymbolIterator symbols)
template<typename SymbolIterator >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void	nvbio::string_to_iupac16 (const char *begin, const char *end, SymbolIterator symbols)
template<typename SymbolIterator >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void	nvbio::string_to_iupac16 (const char *begin, SymbolIterator symbols)