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Class List
Here are the classes, structs, unions and interfaces with brief descriptions:
[detail level 123456]
oNBamTools
oNboost
oNcufmi
oNdivsufsortxx
oNmgpu
oNnvbioDefine a vector_view POD type and plain_view() for std::vector
oNstd
oC__bam_mplp_t
oC__bgzidx_t
oC__faidx_t
oC__hts_idx_t
oC__kstring_t
oC__linkbuf_t
oC_bcf_sr_regions_t
oC_bcf_sweep_t
oC_profile
oC_region_t
oC_trbudget_t
oC_U32_S
oC_U64_S
oCabove_threshold
oCactive_region
oCalignment_end
oCargs_t
oCassembly_pipeline
oCbam1_core_t
oCbam1_t
oCBAM_alignment_batch_raw
oCBAM_alignment_batch_SoA
oCBAM_alignment_header
oCBAM_alignment_record
oCBAM_CRQ_index
oCbam_hdr_t
oCBAM_header
oCBAM_NAUX_index
oCbam_pileup1_t
oCbcf1_t
oCbcf_dec_t
oCbcf_fmt_t
oCbcf_hdr_t
oCbcf_hrec_t
oCbcf_idinfo_t
oCbcf_idpair_t
oCbcf_info_t
oCbcf_sr_t
oCbcf_srs_t
oCBGZF
oCbgzf_mtaux_t
oCbgzidx1_t
oCbins_t
oCblock_occupancy_functor
oCBloomFilters
oCcache_t
oCCacheManager
oCcigar
oCcigar_op
oCcode
oCcollapse_same_start_kmers
oCcompute_prefix_global_id
oCcompute_suffix_global_id
oCconfig_s
oCcoord_to_seq
oCcount_overlapped_adjacencies
oCcram_beta_decoder
oCcram_block
oCcram_block_compression_hdr
oCcram_block_slice_hdr
oCcram_byte_array_len_decoder
oCcram_byte_array_len_encoder
oCcram_byte_array_stop_decoder
oCcram_codec
oCcram_container
oCcram_decode_job
oCcram_external_decoder
oCcram_fd
oCcram_feature
oCcram_file_def
oCcram_gamma_decoder
oCcram_huffman_code
oCcram_huffman_decoder
oCcram_huffman_encoder
oCcram_index
oCcram_job
oCcram_map
oCcram_metrics
oCcram_range
oCcram_record
oCcram_slice
oCcram_stats
oCcram_subexp_decoder
oCcstate_t
oCct_data_s
oCD_KmerSet
oCdebruijn_graph
oCdivide_by_two
oCedge_weights_functor
oCErrorCorrectStage
oCextract_active_region_source_sink
oCextract_non_overlapped_repeats
oCextract_repeat_adjacencies
oCextract_super_kmers_functor
oCextract_unique_adjacencies
oCfaidx1_t
oCfind_k_best_paths_functor
oCfind_max_kmer_overlaps
oCflip_edges
oCfmt_aux_t
oCgenome_infixes
oCgenome_loc
oCget_global_id
oCget_kmer_reg_id
oCget_kmer_seq_id
oCget_kmer_size
oCget_prefix_global_id
oCget_prefix_global_id_by_idx
oCget_suffix_global_id_by_idx
oCglobal_to_sorted_id
oCglobal_to_uid
oCgraph_functor
oCgz_header_s
oCgz_state
oCgzFile_s
oChash_functor1
oChash_functor2
oChFILE
oChFILE_backend
oChFILE_fd
oChFILE_mem
oChFILE_net
oChgacc_t
oChts_cram_idx_t
oChts_itr_t
oChts_pair64_t
oCHTSBAMReader
oCHTSBAMWriter
oChtsFile
oCinflate_state
oCInputStage
oCInputStageData
oCinternal_state
oCis_invalid_super_kmer
oCis_repeat_kmer
oCis_unique_kmer
oCis_unique_suffix_id
oCis_unique_uid
oCkmer_count_tuple_sum
oCkmer_key_rid_eq
oCkmer_key_sid_eq
oCkmer_pos_sid_eq
oCkmer_uid_eq
oCkmer_word_extractor_functor
oCKmerCode
oCkmers_to_64b_functor
oCknetFile_s
oCks_isort_stack_t
oCks_tokaux_t
oCkswq_t
oCkswr_t
oCLZ4_stream_t
oCLZ4_stream_t_internal
oCLZ4_streamDecode_t
oCLZ4_streamDecode_t_internal
oCLZ4_streamHC_t
oCLZ4F_cctx_internal_t
oCLZ4F_compressOptions_t
oCLZ4F_dctx_internal_t
oCLZ4F_decompressOptions_t
oCLZ4F_frameInfo_t
oCLZ4F_preferences_t
oCLZ4HC_Data_Structure
oCmark_kmer_uniqueness
oCmark_unique_prefix_kmer
oCMD5_CTX
oCmempool_t
oCmFILE
oCnum_adj_repeats
oCnum_non_overlapped_repeats
oCOptions
oCOutputStage
oCOutputStageData
oCpool_alloc_t
oCpool_t
oCpopulate_unique_kmer_data
oCprint_super_kmer_functor
oCread_infixes
oCref_entry
oCrefs_t
oCregion1_t
oCs_align
oCSAM_hdr
oCSAM_hdr_item_s
oCSAM_hdr_tag_s
oCSAM_PG
oCSAM_RG
oCSAM_SQ
oCSampleKmersStage
oCSequenceStats
oCset_global_id
oCset_global_id_region_id
oCsink_score
oCspare_bams
oCstatic_tree_desc_s
oCstore_kmer_unique_ids
oCstring_alloc_t
oCstring_t
oCsuper_coord_to_seq
oCt_pool
oCt_pool_job
oCt_res
oCt_results_queue
oCtbx_conf_t
oCtbx_intv_t
oCtbx_t
oCtest_funct
oCtopological_sort_functor
oCtree_desc_s
oCTrustedKmersStage
oCvariant_t
oCworker_t
oCXXH32_state_t
oCXXH64_state_t
oCXXH_istate32_t
oCXXH_istate64_t
oCz_stream_s
\Czfp