Aligner Tags

Detailed Description

Aligner tags are used to specify the algorithmic family of an Aligner (which can in general be a parametric object). The aligner tag of a given aligner can be retrived with the aligner_tag meta-function. For example the SmithWatermanAligner <TYPE,scoring_scheme_type> has an aligner tag of type SmithWatermanTag.

Classes
struct	nvbio::aln::SmithWatermanTag
	the Smith-Waterman aligner tag More...
struct	nvbio::aln::GotohTag
	the Gotoh aligner tag More...
struct	nvbio::aln::EditDistanceTag
	the Edit Distance aligner tag More...
struct	nvbio::aln::HammingDistanceTag
	the Hamming Distance aligner tag More...
struct	nvbio::aln::aligner_tag< aligner_type >