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output_stream.h
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27 
28 #include <nvbio/basic/types.h>
29 #include <vector>
30 
31 #pragma once
32 
33 namespace nvbio {
34 
37 
41 {
44  virtual ~OutputStream() {}
45 
48  virtual uint32 write(const uint32 bytes, const void* buffer) { return 0; }
49 
52  virtual bool is_valid() const { return true; }
53 };
54 
55 // Base abstract output file class
56 //
57 struct GZOutputFile : public OutputStream
58 {
61  GZOutputFile(const char* name, const char* comp);
62 
65  ~GZOutputFile();
66 
69  uint32 write(const uint32 bytes, const void* buffer);
70 
73  bool is_valid() const { return m_file != NULL; }
74 
75  void* m_file;
76 };
77 
78 // Base abstract output file class
79 //
80 struct LZ4OutputFile : public OutputStream
81 {
84  LZ4OutputFile(const char* name, const char* comp);
85 
89 
92  uint32 write(const uint32 bytes, const void* buffer);
93 
96  bool is_valid() const { return m_file != NULL; }
97 
98  void* m_context;
99  void* m_file;
100  std::vector<uint8> m_buffer;
101 };
102 
105 OutputStream* open_output_file(const char* file_name, const char* compressor, const char* options);
106 
108 
109 } // namespace nvbio