sequence_traits.h

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#pragma once

#include <nvbio/strings/alphabet.h>

namespace nvbio {
namespace io {



template <Alphabet         SEQUENCE_ALPHABET>
struct SequenceDataTraits
{
    static const uint32 SEQUENCE_BITS             = AlphabetTraits<SEQUENCE_ALPHABET>::SYMBOL_SIZE;     
    static const bool   SEQUENCE_BIG_ENDIAN       = true;                                                       
    static const uint32 SEQUENCE_SYMBOLS_PER_WORD = (8*sizeof(uint32))/SEQUENCE_BITS;                           
};


} // namespace io
} // namespace nvbio