stats.cpp File Reference

#include <nvBowtie/bowtie2/cuda/stats.h>
#include <nvbio/basic/html.h>
#include <nvbio/io/alignments.h>
#include <functional>
#include <algorithm>
#include <numeric>
#include <string>

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Namespaces
	nvbio
	Define a vector_view POD type and plain_view() for std::vector.
	nvbio::bowtie2
	nvbio::bowtie2::cuda

Functions
void	nvbio::bowtie2::cuda::generate_kernel_table (const uint32 id, const char *report, const KernelStats &stats)
void	nvbio::bowtie2::cuda::generate_report_header (const uint32 n_reads, const Params &params, AlignmentStats &aln_stats, const uint32 n_devices, const Stats *device_stats, const char *report)
void	nvbio::bowtie2::cuda::generate_device_report (const uint32 id, Stats &stats, AlignmentStats &aln_stats, const char *report)
template<typename T >
void	nvbio::bowtie2::cuda::find_gt2 (const uint32 n, const T *table, uint32 best_bin[2])