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HTSBAMReader Member List

This is the complete list of members for HTSBAMReader, including all inherited members.

headerHTSBAMReader
HTSBAMReader(const char *fname)HTSBAMReader
read_aln_batch(std::vector< bam1_t * > &batch, const uint64 batch_size=1000000)HTSBAMReader
read_aln_batch(BAM_alignment_batch_SoA &batch, const uint64 batch_size=1000000)HTSBAMReader
read_aln_batch_intv(BAM_alignment_batch_SoA &batch, const uint32 contig=1u, const uint64 start=0u, const uint64 end=1000000)HTSBAMReader
~HTSBAMReader()HTSBAMReader