nvbio::BWTEContext< SYMBOL_SIZE, BIG_ENDIAN, storage_type, offsets_iterator > Member List

This is the complete list of members for nvbio::BWTEContext< SYMBOL_SIZE, BIG_ENDIAN, storage_type, offsets_iterator >, including all inherited members.

append_block(const uint32 block_begin, const uint32 block_end, const string_set_type string_set, PagedText< SYMBOL_SIZE, BIG_ENDIAN > &BWT_ext, SparseSymbolSet &BWT_ext_dollars, const bool forward)	nvbio::BWTEContext< SYMBOL_SIZE, BIG_ENDIAN, storage_type, offsets_iterator >
BWTEContext(const int device)	nvbio::BWTEContext< SYMBOL_SIZE, BIG_ENDIAN, storage_type, offsets_iterator >
index_type typedef	nvbio::BWTEContext< SYMBOL_SIZE, BIG_ENDIAN, storage_type, offsets_iterator >
merge_block(const uint32 block_begin, const uint32 block_end, const string_set_type string_set, BWTEBlock &block, PagedText< SYMBOL_SIZE, BIG_ENDIAN > &BWT_ext, SparseSymbolSet &BWT_ext_dollars, const bool forward)	nvbio::BWTEContext< SYMBOL_SIZE, BIG_ENDIAN, storage_type, offsets_iterator >
needed_device_memory(const uint32 _max_block_strings, const uint32 _max_block_suffixes) const	nvbio::BWTEContext< SYMBOL_SIZE, BIG_ENDIAN, storage_type, offsets_iterator >
reserve(const uint32 _max_block_strings, const uint32 _max_block_suffixes)	nvbio::BWTEContext< SYMBOL_SIZE, BIG_ENDIAN, storage_type, offsets_iterator >
sort_block(const uint32 block_begin, const uint32 block_end, const string_set_type string_set, BWTEBlock &block)	nvbio::BWTEContext< SYMBOL_SIZE, BIG_ENDIAN, storage_type, offsets_iterator >
string_set_type typedef	nvbio::BWTEContext< SYMBOL_SIZE, BIG_ENDIAN, storage_type, offsets_iterator >