build(const uint32 q, const uint32 symbol_sz, const string_set_type string_set, const uint32 qlut=0) | nvbio::QGramSetIndexDevice | |
build(const uint32 q, const uint32 symbol_sz, const string_set_type string_set, const seed_functor seeder, const uint32 qlut=0) | nvbio::QGramSetIndexDevice | |
const_plain_view_type typedef | nvbio::QGramSetIndexDevice | |
coord_type typedef | nvbio::QGramSetIndexDevice | |
coord_vector_type typedef | nvbio::QGramSetIndexDevice | |
core_type typedef | nvbio::QGramSetIndexDevice | |
index | nvbio::QGramIndexCore< device_tag, uint64, uint32, uint2 > | |
index_type typedef | nvbio::QGramIndexCore< device_tag, uint64, uint32, uint2 > | |
index_vector_type typedef | nvbio::QGramSetIndexDevice | |
lut | nvbio::QGramIndexCore< device_tag, uint64, uint32, uint2 > | |
n_qgrams | nvbio::QGramIndexCore< device_tag, uint64, uint32, uint2 > | |
n_unique_qgrams | nvbio::QGramIndexCore< device_tag, uint64, uint32, uint2 > | |
operator=(const QGramIndexCore< SystemTag, uint64, uint32, uint2 > &src) | nvbio::QGramSetIndexDevice | |
plain_view_type typedef | nvbio::QGramSetIndexDevice | |
Q | nvbio::QGramIndexCore< device_tag, uint64, uint32, uint2 > | |
qgram_type typedef | nvbio::QGramSetIndexDevice | |
qgram_vector_type typedef | nvbio::QGramSetIndexDevice | |
QGramIndexCore() | nvbio::QGramIndexCore< device_tag, uint64, uint32, uint2 > | inline |
qgrams | nvbio::QGramIndexCore< device_tag, uint64, uint32, uint2 > | |
QL | nvbio::QGramIndexCore< device_tag, uint64, uint32, uint2 > | |
QLS | nvbio::QGramIndexCore< device_tag, uint64, uint32, uint2 > | |
slots | nvbio::QGramIndexCore< device_tag, uint64, uint32, uint2 > | |
symbol_size | nvbio::QGramIndexCore< device_tag, uint64, uint32, uint2 > | |
system_tag typedef | nvbio::QGramSetIndexDevice | |
used_device_memory() const | nvbio::QGramIndexCore< device_tag, uint64, uint32, uint2 > | inline |
used_host_memory() const | nvbio::QGramIndexCore< device_tag, uint64, uint32, uint2 > | inline |