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This is the complete list of members for nvbio::aln::BestColumnSink< ScoreType, N >, including all inherited members.
| best2(uint32 &i1, uint32 &i2, const uint32 min_dist) const | nvbio::aln::BestColumnSink< ScoreType, N > | |
| BestColumnSink(const uint32 column_width=50, const ScoreType min_score=Field_traits< ScoreType >::min()) | nvbio::aln::BestColumnSink< ScoreType, N > | |
| invalidate() | nvbio::aln::BestColumnSink< ScoreType, N > | |
| report(const ScoreType score, const uint2 sink) | nvbio::aln::BestColumnSink< ScoreType, N > | |
| scores | nvbio::aln::BestColumnSink< ScoreType, N > | |
| set_column_width(const uint32 column_width) | nvbio::aln::BestColumnSink< ScoreType, N > | inline |
| set_min_score(const uint32 min_score) | nvbio::aln::BestColumnSink< ScoreType, N > | inline |
| sinks | nvbio::aln::BestColumnSink< ScoreType, N > |
1.8.4