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NVBIO
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NVBIO
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This is the complete list of members for nvbio::aln::priv::GotohScoringContext< BAND_LEN, TYPE, algorithm_tag >, including all inherited members.
| init(const uint32 j, const uint32 N, column_type &column, const scoring_type &scoring, const score_type zero, const score_type infimum) | nvbio::aln::priv::GotohScoringContext< BAND_LEN, TYPE, algorithm_tag > | inline |
| last_column(const uint32 j, const uint32 M, const uint32 N, const column_type column) | nvbio::aln::priv::GotohScoringContext< BAND_LEN, TYPE, algorithm_tag > | inline |
| new_cell(const uint32 i, const uint32 N, const uint32 j, const uint32 M, const score_type score, const DirectionVector dir, const DirectionVector edir, const DirectionVector fdir) | nvbio::aln::priv::GotohScoringContext< BAND_LEN, TYPE, algorithm_tag > | inline |
| previous_column(const uint32 j, const uint32 N, const column_type column) | nvbio::aln::priv::GotohScoringContext< BAND_LEN, TYPE, algorithm_tag > | inline |
1.8.4