NVBIO
|
This is the complete list of members for nvbio::aln::priv::alignment_checkpointed_dispatch< CHECKPOINTS, GotohAligner< TYPE, scoring_type >, pattern_string, qual_string, text_string, column_type >, including all inherited members.
aligner_type typedef | nvbio::aln::priv::alignment_checkpointed_dispatch< CHECKPOINTS, GotohAligner< TYPE, scoring_type >, pattern_string, qual_string, text_string, column_type > | |
dispatch_checkpoints(const aligner_type aligner, const pattern_string pattern, const qual_string quals, const text_string text, const int32 min_score, sink_type &sink, checkpoint_type checkpoints, column_type column) | nvbio::aln::priv::alignment_checkpointed_dispatch< CHECKPOINTS, GotohAligner< TYPE, scoring_type >, pattern_string, qual_string, text_string, column_type > | inlinestatic |
dispatch_submatrix(const aligner_type aligner, const pattern_string pattern, const qual_string quals, const text_string text, const int32 min_score, checkpoint_type checkpoints, const uint32 checkpoint_id, submatrix_type submatrix, column_type column) | nvbio::aln::priv::alignment_checkpointed_dispatch< CHECKPOINTS, GotohAligner< TYPE, scoring_type >, pattern_string, qual_string, text_string, column_type > | inlinestatic |