NVBIO
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Groups Pages
nvbio::alndiff::PEAnalyzer Member List

This is the complete list of members for nvbio::alndiff::PEAnalyzer, including all inherited members.

al_statsnvbio::alndiff::PEAnalyzer
ambiguousnvbio::alndiff::PEAnalyzer
ambiguous_L_not_R_by_mapQnvbio::alndiff::PEAnalyzer
ambiguous_R_not_L_by_mapQnvbio::alndiff::PEAnalyzer
different_ref() const nvbio::alndiff::PEAnalyzerinline
discordant() const nvbio::alndiff::PEAnalyzerinline
discordant_statsnvbio::alndiff::PEAnalyzer
distant() const nvbio::alndiff::PEAnalyzerinline
distant_statsnvbio::alndiff::PEAnalyzer
filtered() const nvbio::alndiff::PEAnalyzerinline
flush()nvbio::alndiff::PEAnalyzerinline
generate_report(const char *aln_file_nameL, const char *aln_file_nameR, const char *report)nvbio::alndiff::PEAnalyzer
m_filternvbio::alndiff::PEAnalyzer
m_id_checknvbio::alndiff::PEAnalyzer
mappednvbio::alndiff::PEAnalyzer
mismatched() const nvbio::alndiff::PEAnalyzerinline
nnvbio::alndiff::PEAnalyzer
n_different_refnvbio::alndiff::PEAnalyzer
n_different_ref1nvbio::alndiff::PEAnalyzer
n_different_ref12nvbio::alndiff::PEAnalyzer
n_different_ref2nvbio::alndiff::PEAnalyzer
n_different_ref_not_ambiguousnvbio::alndiff::PEAnalyzer
n_different_ref_uniquenvbio::alndiff::PEAnalyzer
n_discordantnvbio::alndiff::PEAnalyzer
n_discordant1nvbio::alndiff::PEAnalyzer
n_discordant12nvbio::alndiff::PEAnalyzer
n_discordant2nvbio::alndiff::PEAnalyzer
n_discordant_not_ambiguousnvbio::alndiff::PEAnalyzer
n_discordant_uniquenvbio::alndiff::PEAnalyzer
n_distantnvbio::alndiff::PEAnalyzer
n_distant1nvbio::alndiff::PEAnalyzer
n_distant12nvbio::alndiff::PEAnalyzer
n_distant2nvbio::alndiff::PEAnalyzer
n_distant_not_ambiguousnvbio::alndiff::PEAnalyzer
n_distant_uniquenvbio::alndiff::PEAnalyzer
n_mismatchednvbio::alndiff::PEAnalyzer
not_ambiguousnvbio::alndiff::PEAnalyzer
pairednvbio::alndiff::PEAnalyzer
paired_L_not_R_by_mapQnvbio::alndiff::PEAnalyzer
paired_R_not_L_by_mapQnvbio::alndiff::PEAnalyzer
PEAnalyzer(Filter &filter, const bool id_check)nvbio::alndiff::PEAnalyzer
push(const AlignmentPair &alnL, const AlignmentPair &alnR)nvbio::alndiff::PEAnalyzer
sec_ed_by_ed_lnvbio::alndiff::PEAnalyzer
sec_ed_by_ed_rnvbio::alndiff::PEAnalyzer
sec_score_by_score_lnvbio::alndiff::PEAnalyzer
sec_score_by_score_rnvbio::alndiff::PEAnalyzer
uniquenvbio::alndiff::PEAnalyzer
unique_L_not_R_by_mapQnvbio::alndiff::PEAnalyzer
unique_R_not_L_by_mapQnvbio::alndiff::PEAnalyzer
Generated on Wed Feb 25 2015 08:34:08 for NVBIO by   doxygen 1.8.4