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nvbio::bowtie2::cuda::ComputeThreadSE Member List

This is the complete list of members for nvbio::bowtie2::cuda::ComputeThreadSE, including all inherited members.

alignernvbio::bowtie2::cuda::ComputeThreadSE
ComputeThreadSE(const uint32 _thread_id, const uint32 _device_id, const io::SequenceData &_reference_data, const io::FMIndexData &_driver_data, const std::map< std::string, std::string > &_options, const Params &_params, Stats &_stats)nvbio::bowtie2::cuda::ComputeThreadSE
create()nvbio::Thread< ComputeThreadSE >inline
nvbio::ThreadBase::create(void *(*func)(void *), void *arg)nvbio::ThreadBase
device_idnvbio::bowtie2::cuda::ComputeThreadSE
do_run()nvbio::bowtie2::cuda::ComputeThreadSE
driver_data_devicenvbio::bowtie2::cuda::ComputeThreadSE
driver_data_hostnvbio::bowtie2::cuda::ComputeThreadSE
gauge_batch_size()nvbio::bowtie2::cuda::ComputeThreadSE
get_id() const nvbio::ThreadBaseinline
input_threadnvbio::bowtie2::cuda::ComputeThreadSE
join()nvbio::Thread< ComputeThreadSE >inline
optionsnvbio::bowtie2::cuda::ComputeThreadSE
output_filenvbio::bowtie2::cuda::ComputeThreadSE
paramsnvbio::bowtie2::cuda::ComputeThreadSE
reference_data_devicenvbio::bowtie2::cuda::ComputeThreadSE
reference_data_hostnvbio::bowtie2::cuda::ComputeThreadSE
run()nvbio::bowtie2::cuda::ComputeThreadSE
set_id(const uint32 id)nvbio::ThreadBaseinline
set_input(InputThreadSE *_input_thread)nvbio::bowtie2::cuda::ComputeThreadSEinline
set_output(io::OutputFile *_output_file)nvbio::bowtie2::cuda::ComputeThreadSEinline
statsnvbio::bowtie2::cuda::ComputeThreadSE
thread_idnvbio::bowtie2::cuda::ComputeThreadSE
ThreadBase()nvbio::ThreadBase
~ThreadBase()nvbio::ThreadBase