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nvbio::io::DeviceOutputBatchSE Member List

This is the complete list of members for nvbio::io::DeviceOutputBatchSE, including all inherited members.

alignmentsnvbio::io::DeviceOutputBatchSE
cigarnvbio::io::DeviceOutputBatchSE
countnvbio::io::DeviceOutputBatchSE
DeviceOutputBatchSE(uint32 _count, thrust::device_vector< io::Alignment > &_alignments, DeviceCigarArray _cigar, nvbio::DeviceVectorArray< uint8 > &_mds, thrust::device_vector< uint8 > &_mapq, thrust::device_vector< uint32 > *_read_ids=NULL)nvbio::io::DeviceOutputBatchSEinline
mapqnvbio::io::DeviceOutputBatchSE
mdsnvbio::io::DeviceOutputBatchSE
read_idsnvbio::io::DeviceOutputBatchSE
readback_cigars(HostCigarArray &host_cigars) const nvbio::io::DeviceOutputBatchSE
readback_ids(thrust::host_vector< uint32 > &host_ids) const nvbio::io::DeviceOutputBatchSE
readback_mapq(thrust::host_vector< uint8 > &host_mapq) const nvbio::io::DeviceOutputBatchSE
readback_mds(nvbio::HostVectorArray< uint8 > &host_mds) const nvbio::io::DeviceOutputBatchSE
readback_scores(thrust::host_vector< io::Alignment > &host_alignments) const nvbio::io::DeviceOutputBatchSE
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