NVBIO
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Groups Pages
nvbio::io::OutputFile Member List

This is the complete list of members for nvbio::io::OutputFile, including all inherited members.

alignment_typenvbio::io::OutputFileprotected
bntnvbio::io::OutputFileprotected
close(void)nvbio::io::OutputFilevirtual
configure_mapq_evaluator(int mapq_filter)nvbio::io::OutputFilevirtual
file_namenvbio::io::OutputFileprotected
get_aggregate_statistics(void)nvbio::io::OutputFilevirtual
header()nvbio::io::OutputFileinlinevirtual
iostatsnvbio::io::OutputFileprotected
mapq_filternvbio::io::OutputFileprotected
open(const char *file_name, AlignmentType aln_type, BNT bnt)nvbio::io::OutputFilestatic
OutputFile(const char *file_name, AlignmentType alignment_type, BNT bnt)nvbio::io::OutputFileprotected
pg_argsnvbio::io::OutputFileprotected
pg_idnvbio::io::OutputFileprotected
pg_namenvbio::io::OutputFileprotected
pg_versionnvbio::io::OutputFileprotected
process(struct HostOutputBatchSE &batch)nvbio::io::OutputFileinlinevirtual
process(struct HostOutputBatchPE &batch)nvbio::io::OutputFileinlinevirtual
rg_idnvbio::io::OutputFileprotected
rg_stringnvbio::io::OutputFileprotected
set_program(const char *_pg_id, const char *_pg_name, const char *_pg_version, const char *_pg_args)nvbio::io::OutputFileinline
set_rg(const char *_rg_id, const char *_rg_string)nvbio::io::OutputFileinline
~OutputFile()nvbio::io::OutputFilevirtual
Generated on Wed Feb 25 2015 08:34:24 for NVBIO by   doxygen 1.8.4