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nvbio::io::ReadDataFile_TXT_gz Member List

This is the complete list of members for nvbio::io::ReadDataFile_TXT_gz, including all inherited members.

FILE_EOF enum valuenvbio::io::ReadDataFile
FILE_NOT_READY enum valuenvbio::io::ReadDataFile
FILE_OK enum valuenvbio::io::ReadDataFile
FILE_OPEN_FAILED enum valuenvbio::io::ReadDataFile
FILE_PARSE_ERROR enum valuenvbio::io::ReadDataFile
FILE_STREAM_ERROR enum valuenvbio::io::ReadDataFile
FileState enum namenvbio::io::ReadDataFile
fillBuffer(void)nvbio::io::ReadDataFile_TXT_gzvirtual
is_ok(void)nvbio::io::ReadDataFileinlinevirtual
LONG_READnvbio::io::ReadDataFilestatic
m_buffernvbio::io::ReadDataFile_TXTprotected
m_buffer_posnvbio::io::ReadDataFile_TXTprotected
m_buffer_sizenvbio::io::ReadDataFile_TXTprotected
m_error_charnvbio::io::ReadDataFile_TXTprotected
m_file_namenvbio::io::ReadDataFile_TXTprotected
m_file_statenvbio::io::ReadDataFileprotected
m_flagsnvbio::io::ReadDataFileprotected
m_linenvbio::io::ReadDataFile_TXTprotected
m_loadednvbio::io::ReadDataFileprotected
m_max_readsnvbio::io::ReadDataFileprotected
m_namenvbio::io::ReadDataFile_TXTprotected
m_quality_encodingnvbio::io::ReadDataFile_TXTprotected
m_read_bpnvbio::io::ReadDataFile_TXTprotected
m_read_qnvbio::io::ReadDataFile_TXTprotected
m_truncate_read_lennvbio::io::ReadDataStream
next(const uint32 batch_size, const uint32 batch_bps)nvbio::io::ReadDataFilevirtual
nextChunk(ReadDataRAM *output, uint32 max_reads, uint32 max_bps)nvbio::io::ReadDataFile_TXTprotectedvirtual
ReadDataFile(const uint32 max_reads, const uint32 truncate_read_len, const ReadEncoding flags)nvbio::io::ReadDataFileinlineprotected
ReadDataFile_TXT(const char *read_file_name, const QualityEncoding quality_encoding, const uint32 max_reads, const uint32 max_read_len, const ReadEncoding flags, const uint32 buffer_size=64536u)nvbio::io::ReadDataFile_TXTinlineprotected
ReadDataFile_TXT_gz(const char *read_file_name, const QualityEncoding qualities, const uint32 max_reads, const uint32 max_read_len, const ReadEncoding flags, const uint32 buffer_size=64536u)nvbio::io::ReadDataFile_TXT_gz
ReadDataStream(uint32 truncate_read_len=uint32(-1))nvbio::io::ReadDataStreaminline
~ReadDataFile()nvbio::io::ReadDataFileinlinevirtual
~ReadDataStream()nvbio::io::ReadDataStreaminlinevirtual