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nvbio::io::SequenceDataEncoder Member List

This is the complete list of members for nvbio::io::SequenceDataEncoder, including all inherited members.

alphabet() const nvbio::io::SequenceDataEncoderinline
begin_batch(void)nvbio::io::SequenceDataEncoderinlinevirtual
COMPLEMENT_OP enum valuenvbio::io::SequenceDataEncoder
end_batch(void)nvbio::io::SequenceDataEncoderinlinevirtual
info() const nvbio::io::SequenceDataEncoderinlinevirtual
NO_OP enum valuenvbio::io::SequenceDataEncoder
push_back(const uint32 in_sequence_len, const char *name, const uint8 *base_pairs, const uint8 *quality, const QualityEncoding quality_encoding, const uint32 max_sequence_len, const uint32 trim3, const uint32 trim5, const StrandOp conversion_flags)nvbio::io::SequenceDataEncoderinlinevirtual
reserve(const uint32 n_reads, const uint32 n_bps)nvbio::io::SequenceDataEncoderinlinevirtual
REVERSE_COMPLEMENT_OP enum valuenvbio::io::SequenceDataEncoder
REVERSE_OP enum valuenvbio::io::SequenceDataEncoder
SequenceDataEncoder(const Alphabet alphabet)nvbio::io::SequenceDataEncoderinline
StrandOp enum namenvbio::io::SequenceDataEncoder
~SequenceDataEncoder()nvbio::io::SequenceDataEncoderinlinevirtual
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