nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag > Member List

This is the complete list of members for nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >, including all inherited members.

allocated_device_memory() const	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >	inline
allocated_host_memory() const	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >	inline
bin_time	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >
chunk_loader_type typedef	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >
chunk_set_type typedef	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >
clear_timers()	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >	inline
collect(const string_set_type &string_set, const uint32 bucket_begin, const uint32 bucket_end, uint32 &max_suffix_len, const thrust::host_vector< uint32 > &h_subbuckets, thrust::host_vector< uint2 > &h_suffixes)	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >	inline
collect_time	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >
count(const string_set_type &string_set, thrust::host_vector< uint32 > &h_buckets)	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >	inline
count_time	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >
d_buckets	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >
d_subbuckets	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >
DeviceSetSuffixBucketer(mgpu::ContextPtr _mgpu)	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >	inline
h_bucket_offsets	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >
load_time	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >
log_collect_stats()	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >	inline
log_count_stats()	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >	inline
m_bucketer	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >
m_global_offset	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >
merge_time	nvbio::priv::DeviceSetSuffixBucketer< SYMBOL_SIZE, BIG_ENDIAN, storage_type, N_BITS, DOLLAR_BITS, bucket_type, system_tag >