Strings Module

Detailed Description

This module defines various functions and classes to operate with strings and string-sets which vary for the internal representation. For a deeper explanation, see the Strings Module page.

Modules
	Alphabets
	String Prefetchers
	String Sets
	Vectorized String Loading
	Wavelet Trees

Classes
struct	nvbio::string_iterator< StringType >
struct	nvbio::string_traits< T >
struct	nvbio::string_traits< T * >
struct	nvbio::string_traits< const T * >

Functions
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE uint64	nvbio::length (const char *str)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType >	make_string_iterator (const StringType &string)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool	operator< (const string_iterator< StringType > &it1, const string_iterator< StringType > &it2)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool	operator> (const string_iterator< StringType > &it1, const string_iterator< StringType > &it2)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool	operator<= (const string_iterator< StringType > &it1, const string_iterator< StringType > &it2)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool	operator>= (const string_iterator< StringType > &it1, const string_iterator< StringType > &it2)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool	operator== (const string_iterator< StringType > &it1, const string_iterator< StringType > &it2)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool	operator!= (const string_iterator< StringType > &it1, const string_iterator< StringType > &it2)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType > &	operator++ (string_iterator< StringType > &it)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType >	operator++ (string_iterator< StringType > &it, int dummy)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType > &	operator-- (string_iterator< StringType > &it)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType >	operator-- (string_iterator< StringType > &it, int dummy)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType > &	operator+= (string_iterator< StringType > &it, const typename string_iterator< StringType >::difference_type distance)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType > &	operator-= (string_iterator< StringType > &it, const typename string_iterator< StringType >::difference_type distance)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType >	operator+ (const string_iterator< StringType > it, const typename string_iterator< StringType >::difference_type distance)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType >	operator- (const string_iterator< StringType > it, const typename string_iterator< StringType >::difference_type distance)
template<typename StringType >
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType > ::difference_type	operator- (const string_iterator< StringType > it1, const string_iterator< StringType > it2)

Function Documentation

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE uint64 nvbio::length

(

const char *

str)

length of an ASCII string

Definition at line 44 of file string.h.

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType > make_string_iterator ( const StringType &  string)

related

make a string iterator

Definition at line 98 of file string_iterator.h.

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool operator!= ( const string_iterator< StringType > &  it1, const string_iterator< StringType > &  it2  )

related

inequality test

Definition at line 90 of file string_iterator_inl.h.

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType > operator+ ( const string_iterator< StringType >  it, const typename string_iterator< StringType >::difference_type  distance  )

related

add offset

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType > & operator++ ( string_iterator< StringType > &  it)

related

pre-increment operator

Definition at line 101 of file string_iterator_inl.h.

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType > operator++ ( string_iterator< StringType > &  it, int  dummy  )

related

post-increment operator

Definition at line 111 of file string_iterator_inl.h.

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType > & operator+= ( string_iterator< StringType > &  it, const typename string_iterator< StringType >::difference_type  distance  )

related

add offset

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType > operator- ( const string_iterator< StringType >  it, const typename string_iterator< StringType >::difference_type  distance  )

related

subtract offset

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType >::difference_type operator- ( const string_iterator< StringType >  it1, const string_iterator< StringType >  it2  )

related

difference

Definition at line 181 of file string_iterator_inl.h.

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType > & operator-- ( string_iterator< StringType > &  it)

related

pre-decrement operator

Definition at line 122 of file string_iterator_inl.h.

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType > operator-- ( string_iterator< StringType > &  it, int  dummy  )

related

post-decrement operator

Definition at line 132 of file string_iterator_inl.h.

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE string_iterator< StringType > & operator-= ( string_iterator< StringType > &  it, const typename string_iterator< StringType >::difference_type  distance  )

related

subtract offset

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool operator< ( const string_iterator< StringType > &  it1, const string_iterator< StringType > &  it2  )

related

less than

Definition at line 40 of file string_iterator_inl.h.

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool operator<= ( const string_iterator< StringType > &  it1, const string_iterator< StringType > &  it2  )

related

less than

Definition at line 50 of file string_iterator_inl.h.

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool operator== ( const string_iterator< StringType > &  it1, const string_iterator< StringType > &  it2  )

related

equality test

Definition at line 80 of file string_iterator_inl.h.

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool operator> ( const string_iterator< StringType > &  it1, const string_iterator< StringType > &  it2  )

related

greater than

Definition at line 60 of file string_iterator_inl.h.

template<typename StringType >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE bool operator>= ( const string_iterator< StringType > &  it1, const string_iterator< StringType > &  it2  )

related

greater than

Definition at line 70 of file string_iterator_inl.h.