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alignment.h File Reference
#include <nvbio/basic/types.h>
#include <nvbio/basic/numbers.h>

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Classes

struct  nvbio::alndiff::Alignment
 
struct  nvbio::alndiff::AlignmentPair
 
struct  nvbio::alndiff::AlignmentStream
 

Namespaces

 nvbio
 Define a vector_view POD type and plain_view() for std::vector.
 
 nvbio::alndiff
 

Functions

bool nvbio::alndiff::distant (const Alignment &a1, const Alignment &a2)
 
AlignmentStream * nvbio::alndiff::open_alignment_file (const char *file_name)