BGZF Struct Reference

Detailed description

Definition at line 48 of file bgzf.h.

#include <bgzf.h>

Public Members
int	errcode:16
int	is_write:2
int	is_be:2
int	compress_level:9
int	is_compressed:2
int	is_gzip:1
int	cache_size
int	block_length
int	block_offset
int64_t	block_address
int64_t	uncompressed_address
void *	uncompressed_block
void *	compressed_block
void *	cache
struct hFILE *	fp
struct bgzf_mtaux_t *	mt
bgzidx_t *	idx
int	idx_build_otf
z_stream *	gz_stream

Member Data Documentation

int64_t BGZF::block_address

Definition at line 52 of file bgzf.h.

int BGZF::block_length

Definition at line 51 of file bgzf.h.

int BGZF::block_offset

Definition at line 51 of file bgzf.h.

void* BGZF::cache

Definition at line 54 of file bgzf.h.

int BGZF::cache_size

Definition at line 50 of file bgzf.h.

int BGZF::compress_level

Definition at line 49 of file bgzf.h.

void * BGZF::compressed_block

Definition at line 53 of file bgzf.h.

int BGZF::errcode

Definition at line 49 of file bgzf.h.

struct hFILE* BGZF::fp

Definition at line 55 of file bgzf.h.

z_stream* BGZF::gz_stream

Definition at line 59 of file bgzf.h.

bgzidx_t* BGZF::idx

Definition at line 57 of file bgzf.h.

int BGZF::idx_build_otf

Definition at line 58 of file bgzf.h.

int BGZF::is_be

Definition at line 49 of file bgzf.h.

int BGZF::is_compressed

Definition at line 49 of file bgzf.h.

int BGZF::is_gzip

Definition at line 49 of file bgzf.h.

int BGZF::is_write

Definition at line 49 of file bgzf.h.

struct bgzf_mtaux_t* BGZF::mt

Definition at line 56 of file bgzf.h.

int64_t BGZF::uncompressed_address

Definition at line 52 of file bgzf.h.

void* BGZF::uncompressed_block

Definition at line 53 of file bgzf.h.

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The documentation for this struct was generated from the following file:

• E:/git/nvbio/contrib/htslib/htslib/bgzf.h