nvbio::DCSView Struct Reference

Detailed description

A data structure to hold a Difference Cover Sample

Definition at line 113 of file dcs.h.

#include <dcs.h>

Public Methods
	DCSView (const uint32 _Q=0, const uint32 _N=0, const uint32 _size=0, uint32 *_dc=NULL, uint32 *_lut=NULL, uint32 *_pos=NULL, uint8 *_bitmask=NULL, uint32 *_ranks=NULL)
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE uint32	index (const uint32 i) const

Public Members
const uint32	Q
const uint32	N
uint32 *	dc
uint32 *	lut
uint32 *	pos
uint8 *	bitmask
uint32 *	ranks
const uint32	size

Constructor & Destructor Documentation

nvbio::DCSView::DCSView ( const uint32  _Q = 0, const uint32  _N = 0, const uint32  _size = 0, uint32 *  _dc = NULL, uint32 *  _lut = NULL, uint32 *  _pos = NULL, uint8 *  _bitmask = NULL, uint32 *  _ranks = NULL  )

inline

Definition at line 115 of file dcs.h.

Member Function Documentation

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE uint32 nvbio::DCSView::index

(

const uint32

i)

const

return the sampled position of a given suffix index

Definition at line 129 of file dcs_inl.h.

Member Data Documentation

uint8* nvbio::DCSView::bitmask

Definition at line 144 of file dcs.h.

uint32* nvbio::DCSView::dc

Definition at line 141 of file dcs.h.

uint32* nvbio::DCSView::lut

Definition at line 142 of file dcs.h.

const uint32 nvbio::DCSView::N

Definition at line 140 of file dcs.h.

uint32* nvbio::DCSView::pos

Definition at line 143 of file dcs.h.

const uint32 nvbio::DCSView::Q

Definition at line 139 of file dcs.h.

uint32* nvbio::DCSView::ranks

Definition at line 145 of file dcs.h.

const uint32 nvbio::DCSView::size

Definition at line 146 of file dcs.h.

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The documentation for this struct was generated from the following files:

• E:/git/nvbio/nvbio/sufsort/dcs.h
• E:/git/nvbio/nvbio/sufsort/dcs_inl.h