nvbio::bowtie2::cuda::QualCost< T > Struct Template Reference

Detailed description

template< typename T>
struct nvbio::bowtie2::cuda::QualCost< T >

Simple quality cost function

Definition at line 86 of file scoring.h.

#include <scoring.h>

Public Methods
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE	QualCost ()
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE	QualCost (const T min_val, const T max_val)
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE T	operator() (const int i) const

Public Members
T	m_min_val
T	m_max_val

Static Public Members
static const CostType	COST_TYPE = QUAL_COST

Constructor & Destructor Documentation

template<typename T >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE nvbio::bowtie2::cuda::QualCost< T >::QualCost ( )

inline

Definition at line 91 of file scoring.h.

template<typename T >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE nvbio::bowtie2::cuda::QualCost< T >::QualCost ( const T  min_val, const T  max_val  )

inline

Definition at line 94 of file scoring.h.

Member Function Documentation

template<typename T >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE T nvbio::bowtie2::cuda::QualCost< T >::operator() ( const int  i) const

inline

Definition at line 97 of file scoring.h.

Member Data Documentation

template<typename T >

const CostType nvbio::bowtie2::cuda::QualCost< T >::COST_TYPE = QUAL_COST

static

Definition at line 88 of file scoring.h.

template<typename T >

T nvbio::bowtie2::cuda::QualCost< T >::m_max_val

Definition at line 104 of file scoring.h.

template<typename T >

T nvbio::bowtie2::cuda::QualCost< T >::m_min_val

Definition at line 103 of file scoring.h.

---

The documentation for this struct was generated from the following file:

• E:/git/nvbio/nvBowtie/bowtie2/cuda/scoring.h