nvbio::io::SequenceDataTraits< SEQUENCE_ALPHABET > Struct Template Reference

Detailed description

template< Alphabet SEQUENCE_ALPHABET>
struct nvbio::io::SequenceDataTraits< SEQUENCE_ALPHABET >

Definition at line 42 of file sequence_traits.h.

#include <sequence_traits.h>

Static Public Members
static const uint32	SEQUENCE_BITS = AlphabetTraits<SEQUENCE_ALPHABET>::SYMBOL_SIZE
	symbol size for reads More...
static const bool	SEQUENCE_BIG_ENDIAN = true
	big endian? More...
static const uint32	SEQUENCE_SYMBOLS_PER_WORD = (8*sizeof(uint32))/SEQUENCE_BITS
	symbols per word More...

Member Data Documentation

template<Alphabet SEQUENCE_ALPHABET>

const bool nvbio::io::SequenceDataTraits< SEQUENCE_ALPHABET >::SEQUENCE_BIG_ENDIAN = true

static

big endian?

Definition at line 45 of file sequence_traits.h.

template<Alphabet SEQUENCE_ALPHABET>

const uint32 nvbio::io::SequenceDataTraits< SEQUENCE_ALPHABET >::SEQUENCE_BITS = AlphabetTraits<SEQUENCE_ALPHABET>::SYMBOL_SIZE

static

symbol size for reads

Definition at line 44 of file sequence_traits.h.

template<Alphabet SEQUENCE_ALPHABET>

const uint32 nvbio::io::SequenceDataTraits< SEQUENCE_ALPHABET >::SEQUENCE_SYMBOLS_PER_WORD = (8*sizeof(uint32))/SEQUENCE_BITS

static

symbols per word

Definition at line 46 of file sequence_traits.h.

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The documentation for this struct was generated from the following file:

• E:/git/nvbio/nvbio/io/sequence/sequence_traits.h