nvbio::priv::string_suffix_difference< string_type > Struct Template Reference

Detailed description

template< typename string_type>
struct nvbio::priv::string_suffix_difference< string_type >

A binary functor calculating whether two suffixes differ (returning 1) or not (returning 0)

Definition at line 774 of file sufsort_priv.h.

#include <sufsort_priv.h>

Public Types
typedef uint32	first_argument_type
typedef uint32	second_argument_type
typedef uint32	result_type

Public Methods
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE	string_suffix_difference (const uint64 _string_len, const string_type _string, const uint32 _cmp_len)
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE result_type	operator() (const uint64 suffix_idx1, const uint64 suffix_idx2) const

Public Members
const uint64	string_len
string_type	string
uint32	cmp_len

Member Typedef Documentation

template<typename string_type >

typedef uint32 nvbio::priv::string_suffix_difference< string_type >::first_argument_type

Definition at line 776 of file sufsort_priv.h.

template<typename string_type >

typedef uint32 nvbio::priv::string_suffix_difference< string_type >::result_type

Definition at line 778 of file sufsort_priv.h.

template<typename string_type >

typedef uint32 nvbio::priv::string_suffix_difference< string_type >::second_argument_type

Definition at line 777 of file sufsort_priv.h.

Constructor & Destructor Documentation

template<typename string_type >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE nvbio::priv::string_suffix_difference< string_type >::string_suffix_difference ( const uint64  _string_len, const string_type  _string, const uint32  _cmp_len  )

inline

constructor

Definition at line 783 of file sufsort_priv.h.

Member Function Documentation

template<typename string_type >

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE result_type nvbio::priv::string_suffix_difference< string_type >::operator() ( const uint64  suffix_idx1, const uint64  suffix_idx2  ) const

inline

return the w'th word of the i-th string

Definition at line 791 of file sufsort_priv.h.

Member Data Documentation

template<typename string_type >

uint32 nvbio::priv::string_suffix_difference< string_type >::cmp_len

Definition at line 809 of file sufsort_priv.h.

template<typename string_type >

string_type nvbio::priv::string_suffix_difference< string_type >::string

Definition at line 808 of file sufsort_priv.h.

template<typename string_type >

const uint64 nvbio::priv::string_suffix_difference< string_type >::string_len

Definition at line 807 of file sufsort_priv.h.

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The documentation for this struct was generated from the following file:

• E:/git/nvbio/nvbio/sufsort/sufsort_priv.h