store_kmer_unique_ids Struct Reference

Detailed description

Definition at line 407 of file kmers_inl.h.

#include <kmers_inl.h>

Public Methods
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE	store_kmer_unique_ids (uint32 *_unique_id_map, const uint64 *_sorted_kmer_keys, const SequenceSetKmerCoord *_sorted_coords)
NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void	operator() (const thrust::tuple< uint32, uint32 > &uid_kid) const

Public Members
uint32 *	unique_id_map
const uint64 *	sorted_kmer_keys
const SequenceSetKmerCoord *	sorted_coords

Constructor & Destructor Documentation

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE store_kmer_unique_ids::store_kmer_unique_ids ( uint32 *  _unique_id_map, const uint64 *  _sorted_kmer_keys, const SequenceSetKmerCoord *  _sorted_coords  )

inline

Definition at line 414 of file kmers_inl.h.

Member Function Documentation

NVBIO_FORCEINLINE NVBIO_HOST_DEVICE void store_kmer_unique_ids::operator() ( const thrust::tuple< uint32, uint32 > &  uid_kid) const

inline

Definition at line 418 of file kmers_inl.h.

Member Data Documentation

const SequenceSetKmerCoord* store_kmer_unique_ids::sorted_coords

Definition at line 411 of file kmers_inl.h.

const uint64* store_kmer_unique_ids::sorted_kmer_keys

Definition at line 410 of file kmers_inl.h.

uint32* store_kmer_unique_ids::unique_id_map

Definition at line 409 of file kmers_inl.h.

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The documentation for this struct was generated from the following file:

• E:/git/nvbio/nvMicroAssembly/kmers_inl.h